RED HOT Contributors

 

Genomic characterization of two novel pathogenic avipoxviruses isolated from pacific shearwaters (Ardenna spp.)

0
   

CNPV001

CNPV001 hypothetical protein

       

72

   

SWPV2-001

CNPV002

CNPV002 hypothetical protein

 

92.941

 

171

171

 

SWPV1-001

SWPV2-002

CNPV003

CNPV003 C-type lectin-like protein

32.044

85.99

181

208

204

 

SWPV1-002

 

CNPV004

CNPV004 ankyrin repeat protein

56.458

 

468

 

514

 

SWPV1-003

SWPV2-003

CNPV005

CNPV005 conserved hypothetical protein

87.387

99.55

220

222

222

   

SWPV2-004

CNPV006

CNPV006 hypothetical protein

 

88.71

 

134

182

SWPV2: C-terminus fragment, not likely translated

   

CNPV007

CNPV007 ankyrin repeat protein

       

674

 

SWPV1-004

SWPV2-005

CNPV008

CNPV008 C-type lectin-like protein

50

98.225

174

169

169

   

SWPV2-006

CNPV009

CNPV009 ankyrin repeat protein

 

99.564

 

688

688

     

CNPV010

CNPV010 ankyrin repeat protein

       

734

   

SWPV2-007

CNPV011

CNPV011 ankyrin repeat protein

 

99.147

 

586

586

   

SWPV2-008

CNPV012

CNPV012 hypothetical protein

 

100

 

189

189

   

SWPV2-009

CNPV013

CNPV013 hypothetical protein

 

98.81

 

168

168

   

SWPV2-010

CNPV014

CNPV014 immunoglobulin-like domain protein

 

99.184

 

490

490

   

SWPV2-011

CNPV015

CNPV015 ankyrin repeat protein

 

97.538

 

528

528

 

SWPV1-005

   

CNPV035 C-type lectin-like protein

35.556

 

138

 

134

 

SWPV1-006

   

CNPV318 ankyrin repeat protein

58.932

 

487

 

514

 

SWPV1-007

SWPV2-012

CNPV016

CNPV016 C-type lectin-like protein

52.128

98.81

117

168

168

 

SWPV1-008

SWPV2-013

CNPV017

CNPV017 ankyrin repeat protein

64.471

97.912

425

479

486

 

SWPV1-009

   

CNPV295 ankyrin repeat protein

56.41

 

277

 

396

   

SWPV2-014

CNPV018

CNPV018 IL-10-like protein

 

90.805

 

190

191

   

SWPV2-015

CNPV019

CNPV019 ankyrin repeat protein

 

99.083

 

436

436

 

SWPV1-010

SWPV2-016

CNPV020

CNPV020 ankyrin repeat protein

56.311

99.761

412

419

419

 

SWPV1-011

   

CNPV320 Ig-like domain protein

31.656

 

483

 

469

 

SWPV1-012

SWPV2-017

CNPV021

CNPV021 ankyrin repeat protein

62.313

99.626

528

535

535

 

SWPV1-013

SWPV2-018

CNPV022

CNPV022 putative serpin

65.642

98.324

356

358

358

 

SWPV1-014

   

PEPV260 ankyrin repeat protein

53.158

 

190

 

192

 

SWPV1-015

   

CNPV011 ankyrin repeat protein

34

 

530

 

586

   

SWPV2-019

CNPV023

CNPV023 vaccinia C4L/C10L-like protein

 

98.595

 

424

427

   

SWPV2-020

CNPV024

CNPV024 hypothetical protein

 

96.629

 

178

178

 

SWPV1-016

SWPV2-021

CNPV025

CNPV025 alpha-SNAP-like protein

57.491

98.667

304

300

300

 

SWPV1-017

SWPV2-022

CNPV026

CNPV026 ankyrin repeat protein

54.271

98.953

397

382

382

 

SWPV1-018

SWPV2-023

CNPV027

CNPV027 ankyrin repeat protein

59.375

98.722

646

626

626

 

SWPV1-019

SWPV2-024

CNPV028

CNPV028 ankyrin repeat protein

57.618

99.164

408

365

362

 

SWPV1-020

SWPV2-025

CNPV029

CNPV029 C-type lectin-like protein

50.35

99.296

142

142

142

 

SWPV1-021

SWPV2-026

CNPV030

CNPV030 ankyrin repeat protein

63.72

98.529

345

340

340

 

SWPV1-022

SWPV2-027

CNPV031

CNPV031 hypothetical protein

60.331

97.479

120

119

119

 

SWPV1-023

   

CNPV013 conserved hypothetical protein

44.048

 

168

 

168

 

SWPV1-024

SWPV2-028

CNPV032

CNPV032 Ig-like domain putative IFN-gamma binding protein

51.837

92.149

242

242

242

 

SWPV1-025

SWPV2-029

CNPV033

CNPV033 Ig-like domain protein

48.095

93.496

238

246

246

   

SWPV2-030

CNPV034

CNPV034 ankyrin repeat protein

 

99.848

 

659

659

   

SWPV2-031

CNPV035

CNPV035 C-type lectin-like protein

 

94.776

 

133

134

 

SWPV1-026

SWPV2-032

CNPV036

CNPV036 conserved hypothetical protein

48.235

98.947

88

95

95

 

SWPV1-027

SWPV2-033

CNPV037

CNPV037 conserved hypothetical protein

63.068

99.441

178

179

179

 

SWPV1-028

SWPV2-034

CNPV038

CNPV038 vaccinia C4L/C10L-like protein

54.523

99.516

411

413

413

 

SWPV1-029

SWPV2-035

CNPV039

CNPV039 G protein-coupled receptor-like protein

67.284

97.859

323

327

327

 

SWPV1-030

SWPV2-036

CNPV040

CNPV040 ankyrin repeat protein

57.36

93.401

589

591

591

SWPV2: High SNP Density

SWPV1-031

SWPV2-037

CNPV041

CNPV041 ankyrin repeat protein

66.284

98.605

432

430

430

 

SWPV1-032

SWPV2-038

CNPV042

CNPV042 ankyrin repeat protein

72.712

99.339

608

605

605

 

SWPV1-033

SWPV2-039

CNPV043

CNPV043 conserved hypothetical protein

74.627

99.005

202

201

201

 

SWPV1-034

SWPV2-040

CNPV044

CNPV044 ankyrin repeat protein

67.316

99.583

470

480

480

 

SWPV1-035

SWPV2-041

CNPV045

CNPV045 G protein-coupled receptor-like protein

65.231

100

331

332

332

 

SWPV1-036

SWPV2-042

CNPV046

CNPV046 ankyrin repeat protein

68.08

98.667

452

450

450

 

SWPV1-037

SWPV2-043

CNPV047

CNPV047 conserved hypothetical protein

65.6

99.194

125

124

124

 

SWPV1-038

SWPV2-044

CNPV048

CNPV048 alkaline phosphodiesterase-like protein

68.238

98.502

804

801

801

 

SWPV1-039

SWPV2-045

CNPV049

CNPV049 hypothetical protein

72.667

100

148

150

150

 

SWPV1-040

SWPV2-046

CNPV050

CNPV050 ankyrin repeat protein

67.422

98.864

352

352

352

 

SWPV1-041

SWPV2-047

CNPV051

CNPV051 DNase II-like protein

63.683

96.75

398

408

401

 

SWPV1-042

SWPV2-048

CNPV052

CNPV052 C-type lectin-like protein

50

100

182

171

171

 

SWPV1-043

   

FWPV ankyrin repeat protein

45

 

329

 

406

 

SWPV1-044

SWPV2-049

CNPV053

CNPV053 conserved hypothetical protein

68.148

100

135

146

146

 

SWPV1-045

SWPV2-050

CNPV054

CNPV054 conserved hypothetical protein

62.59

99.286

141

140

140

 

SWPV1-046

SWPV2-051

CNPV055

CNPV055 conserved hypothetical protein

74.534

100

162

163

163

 

SWPV1-047

SWPV2-052

CNPV056

CNPV056 dUTPase

80.986

98.621

155

145

145

 

SWPV1-048

SWPV2-053

CNPV057

CNPV057 putative serpin

63.107

99.02

301

306

306

 

SWPV1-049

SWPV2-054

CNPV058

CNPV058 bcl-2 like protein

51.744

98.857

174

180

175

 

SWPV1-050

SWPV2-055

CNPV059

CNPV059 putative serpin

71.302

99.704

338

338

338

 

SWPV1-051

SWPV2-056

CNPV060

CNPV060 conserved hypothetical protein

46.939

95.098

236

206

316

SWPV2: Large internal deletion, Translated but not likely functional

SWPV1-052

SWPV2-057

CNPV061

CNPV061 DNA ligase

80.995

98.761

567

565

565

 

SWPV1-053

SWPV2-058

CNPV062

CNPV062 putative serpin

70.94

100

349

350

350

 

SWPV1-054

SWPV2-059

CNPV063

CNPV063 hydroxysteroid dehydrogenase-like protein

71.348

99.441

359

358

358

 

SWPV1-055

SWPV2-060

CNPV064

CNPV064 TGF-beta-like protein

56.897

98.587

272

283

282

 

SWPV1-056

SWPV2-061

CNPV065

CNPV065 semaphorin-like protein

69.735

99.485

573

583

583

 

SWPV1-057

SWPV2-062

CNPV066

CNPV066 hypothetical protein

37.349

98.519

139

399

405

SWPV1: Low BLAST hits, possible unique ORF

 

SWPV2-063

CNPV067

CNPV067 hypothetical protein

 

100

 

57

57

 

SWPV1-058

   

no significant BLAST hits

       

239

SWPV1: Possible Unique ORF

SWPV1-059

SWPV2-064

CNPV068

CNPV068 GNS1/SUR4-like protein

84.825

99.611

257

257

257

 

SWPV1-060

SWPV2-065

CNPV069

CNPV069 late transcription factor VLTF-2

87.5

100

154

155

155

 

SWPV1-061

SWPV2-066

CNPV070

CNPV070 putative rifampicin resistance protein, IMV assembly

88.065

100

553

551

551

 

SWPV1-062

SWPV2-067

CNPV071

CNPV071 mRNA capping enzyme small subunit

89.273

100

289

289

289

   

SWPV2-068

CNPV072

CNPV072 CC chemokine-like protein

 

96.262

 

132

312

SWPV2: N-terminus fragment

SWPV1-063

SWPV2-069

CNPV073

CNPV073 hypothetical protein

45.263

100

110

109

109

 

SWPV1-064

SWPV2-070

CNPV074

CNPV074 NPH-I, transcription termination factor

92.756

99.685

635

635

635

 

SWPV1-065

SWPV2-071

CNPV075

CNPV075 mutT motif putative gene expression regulator

79.295

100

226

228

230

 

SWPV1-066

SWPV2-072

CNPV076

CNPV076 mutT motif

84.549

99.569

233

232

232

     

CNPV077

CNPV077 hypothetical protein

       

78

 

SWPV1-067

   

CNPV011 ankyrin repeat protein

29.806

 

435

 

586

 

SWPV1-068

SWPV2-073

CNPV078

CNPV078 RNA polymerase subunit RPO18

82.39

100

161

160

160

   

SWPV2-074

CNPV079

CNPV079 Ig-like domain protein

 

94.161

 

274

272

 

SWPV1-069

SWPV2-075

CNPV080

CNPV080 early transcription factor small subunit VETFS

96.682

100

633

633

633

   

SWPV2-076

CNPV081

CNPV081 Ig-like domain protein

 

97.006

 

334

333

 

SWPV1-070

SWPV2-077

CNPV082

CNPV082 NTPase, DNA replication

88.818

99.748

790

794

794

 

SWPV1-071

SWPV2-078

CNPV083

CNPV083 CC chemokine-like protein

60.352

91.855

223

221

221

 

SWPV1-072

   

CNPV215 CC chemokine-like protein

30.994

 

195

 

204

 

SWPV1-073

SWPV2-079

CNPV084

CNPV084 uracil DNA glycosylase

86.364

97.706

220

218

218

 

SWPV1-074

SWPV2-080

CNPV085

CNPV085 putative RNA phosphatase

67.895

74.312

245

303

403

SWPV2: High SNP Density

SWPV1-075

   

CNPV216 conserved hypothetical protein

39.225

 

398

 

404

 

SWPV1-076

SWPV2-081

CNPV086

CNPV086 TNFR-like protein

67.327

71.569

103

112

117

   

SWPV2-082

CNPV087

CNPV087 putative glutathione peroxidase

 

98.473

 

131

198

SWPV2: C-terminus fragment, not likely translated

SWPV1-077

   

CNPV227 N1R/p28-like protein

74.638

 

256

 

359

 

SWPV1-078

SWPV2-083

CNPV088

CNPV088 conserved hypothetical protein

55.769

97

104

100

100

 

SWPV1-079

SWPV2-084

CNPV089

CNPV089 conserved hypothetical protein

64.935

100

164

159

159

 

SWPV1-080

SWPV2-085

CNPV090

CNPV090 conserved hypothetical protein

62.393

100

124

127

127

 

SWPV1-081

SWPV2-086

CNPV091

CNPV091 HT motif protein

64.634

100

77

83

83

 

SWPV1-082

SWPV2-087

CNPV092

CNPV092 conserved hypothetical protein

64.901

97.945

140

146

146

 

SWPV1-083

SWPV2-088

CNPV093

CNPV093 virion protein

60.37

99.625

270

267

267

 

SWPV1-084

SWPV2-089

CNPV094

CNPV094 T10-like protein

75

98.909

282

275

275

 

SWPV1-085

SWPV2-090

CNPV095

CNPV095 conserved hypothetical protein

71.111

100

47

45

45

 

SWPV1-086

SWPV2-091

CNPV096

CNPV096 ubiquitin

100

100

77

85

85

 

SWPV1-087

SWPV2-092

CNPV097

CNPV097 conserved hypothetical protein

70.031

99.705

298

339

339

 

SWPV1-088

SWPV2-093

CNPV098

CNPV098 hypothetical protein

67.442

98.75

61

80

80

 

SWPV1-089

SWPV2-094

CNPV099

CNPV099 beta-NGF-like protein

62.162

97.949

186

195

195

 

SWPV1-090

SWPV2-095

CNPV100

CNPV100 putative interleukin binding protein

51.176

98.225

211

168

169

   

SWPV2-096

CNPV101

CNPV101 hypothetical protein

 

98.824

 

85

85

 

SWPV1-091

SWPV2-097

CNPV102

CNPV102 conserved hypothetical protein

54.167

99.048

102

105

105

 

SWPV1-092

SWPV2-098

CNPV103

CNPV103 N1R/p28-like protein

62.304

98.947

188

190

190

 

SWPV1-093

SWPV2-099

CNPV104

CNPV104 putative glutaredoxin 2, virion morphogenesis

86.4

99.2

125

125

125

 

SWPV1-094

SWPV2-100

CNPV105

CNPV105 conserved hypothetical protein

77.35

98.718

234

234

234

 

SWPV1-095

SWPV2-101

CNPV106

CNPV106 putative elongation factor

76.829

98.039

103

102

102

   

SWPV2-102

CNPV107

CNPV107 hypothetical protein

 

100

 

77

77

 

SWPV1-096

   

PEPV083 transforming growth factor B

64

 

444

 

336

 

SWPV1-097

SWPV2-103

CNPV108

CNPV108 putative metalloprotease, virion morphogenesis

85.489

100

633

632

632

 

SWPV1-098

SWPV2-104

CNPV109

CNPV109 NPH-II, RNA helicase

86.05

99.706

681

681

681

 

SWPV1-099

SWPV2-105

CNPV110

CNPV110 virion core proteinase

87.441

99.763

421

422

422

 

SWPV1-100

SWPV2-106

CNPV111

CNPV111 DNA-binding protein

80.612

99.488

391

391

391

 

SWPV1-101

SWPV2-107

CNPV112

CNPV112 putative IMV membrane protein

81.481

100

81

81

81

 

SWPV1-102

SWPV2-108

CNPV113

CNPV113 thymidine kinase

75.978

99.441

181

179

179

 

SWPV1-103

SWPV2-109

CNPV114

CNPV114 HT motif protein

69.62

100

79

82

82

 

SWPV1-104

SWPV2-110

CNPV115

CNPV115 DNA-binding phosphoprotein

71.429

82.353

282

289

289

SWPV2: High SNP density

SWPV1-105

SWPV2-111

CNPV116

CNPV116 unnamed protein product

73.913

98.551

66

69

69

 

SWPV1-106

SWPV2-112

CNPV117

CNPV117 DNA-binding virion protein

88.854

99.677

314

310

310

 

SWPV1-107

SWPV2-113

CNPV118

CNPV118 conserved hypothetical protein

75.762

99.387

656

652

653

 

SWPV1-108

SWPV2-114

CNPV119

CNPV119 virion core protein

83.969

100

131

131

131

 

SWPV1-109

SWPV2-115

CNPV120

CNPV120 putative IMV redox protein, virus assembly

80.851

100

94

93

93

 

SWPV1-110

SWPV2-116

CNPV121

CNPV121 DNA polymerase

89.17

99.899

988

988

988

 

SWPV1-111

 

CNPV122

CNPV122 putative membrane protein

83.088

 

273

 

274

 

SWPV1-112

SWPV2-117

CNPV123

CNPV123 conserved hypothetical protein

82.312

85.336

571

502

571

SWPV2: High SNP density

SWPV1-113

SWPV2-118

CNPV124

CNPV124 variola B22R-like protein

67

98.957

1906

1916

1918

 

SWPV1-114

SWPV2-119

CNPV125

CNPV125 variola B22R-like protein

71.669

99.66

1742

1767

1767

 

SWPV1-115

SWPV2-120

CNPV126

CNPV126 variola B22R-like protein

64.456

98.847

1902

1839

1951

SWPV2: N-terminus fragment

 

SWPV2-121

 

CNPV126 variola B22R-like protein

 

96

 

153

1951

SWPV2: C-terminus fragment, not likely translated

SWPV1-116

SWPV2-122

CNPV127

CNPV127 RNA polymerase subunit RPO30

96.154

100

182

182

182

 

SWPV1-117

SWPV2-123

CNPV128

CNPV128 conserved hypothetical protein

77.072

98.752

742

721

721

SWPV2: High SNP Density

SWPV1-118

SWPV2-124

CNPV129

CNPV129 poly(A) polymerase large subunit PAPL

83.898

99.788

472

472

472

 

SWPV1-119

SWPV2-125

CNPV130

CNPV130 DNA-binding virion core protein

76.471

100

114

119

119

 

SWPV1-120

SWPV2-126

CNPV131

CNPV131 conserved hypothetical protein

64.115

99.517

212

207

207

 

SWPV1-121

SWPV2-127

CNPV132

CNPV132 conserved hypothetical protein

81.081

99.324

151

148

148

 

SWPV1-122

SWPV2-128

CNPV133

CNPV133 conserved hypothetical protein

73.737

100

90

99

99

 

SWPV1-123

SWPV2-129

CNPV134

CNPV134 variola B22R-like protein

65.517

99.001

1774

1801

1801

 

SWPV1-124

SWPV2-130

CNPV135

CNPV135 putative palmitylated EEV envelope lipase

89.418

99.735

378

378

378

 

SWPV1-125

SWPV2-131

CNPV136

CNPV136 putative EEV maturation protein

75.602

99.68

622

625

625

 

SWPV1-126

SWPV2-132

CNPV137

CNPV137 conserved hypothetical protein

62.26

98.925

467

462

465

 

SWPV1-127

SWPV2-133

CNPV138

CNPV138 putative serine/threonine protein kinase, virus assembly

83.632

100

445

444

444

 

SWPV1-128

SWPV2-134

CNPV139

CNPV139 conserved hypothetical protein

81.69

100

213

213

213

 

SWPV1-129

SWPV2-135

CNPV140

CNPV140 conserved hypothetical protein

78.788

100

65

66

66

 

SWPV1-130

SWPV2-136

CNPV141

CNPV141 HAL3-like domain protein

88.333

100

182

184

184

 

SWPV1-131

   

no significant BLAST hits

28

 

101

 

571

SWPV1: Possible Unique ORF

SWPV1-132

SWPV2-137

CNPV142

CNPV142 N1R/p28-like protein

48.266

98.442

314

321

321

 

SWPV1-133

SWPV2-138

CNPV143

CNPV143 ankyrin repeat protein

54.103

98.361

634

671

671

 

SWPV1-134

SWPV2-139

CNPV144

CNPV144 ankyrin repeat protein

59.011

99.281

562

556

556

 

SWPV1-135

SWPV2-140

CNPV145

CNPV145 conserved hypothetical protein

75.814

100

439

440

440

 

SWPV1-136

SWPV2-141

CNPV146

CNPV146 RNA polymerase subunit RPO7

88.525

100

66

62

62

 

SWPV1-137

SWPV2-142

CNPV147

CNPV147 conserved hypothetical protein

80.851

100

188

188

188

 

SWPV1-138

SWPV2-143

CNPV148

CNPV148 virion core protein

86.533

100

347

348

348

   

SWPV2-144

CNPV149

CNPV149 putative thioredoxin binding protein

 

99.673

 

306

306

     

CNPV150

CNPV150 ankyrin repeat protein

       

351

   

SWPV2-145

CNPV151

CNPV151 ankyrin repeat protein

 

99.029

 

412

412

   

SWPV2-146

CNPV152

CNPV152 hypothetical protein

 

98

 

149

187

SWPV2: C-terminus fragment, not likely translated

 

SWPV2-147

CNPV153

CNPV153 Rep-like protein

 

99.359

 

312

312

 

SWPV1-139

   

CNPV159 N1R/p28-like protein

78.488

 

333

 

337

 

SWPV1-140

   

FWPV121 CC chemokine-like protein

46

 

93

 

121

 

SWPV1-141

SWPV2-148

CNPV154

CNPV154 variola B22R-like protein

90.067

98.286

1939

875

1928

SWPV2: N-terminus fragment/SWPV1: Low SNP Density

SWPV1-142

SWPV2-149

CNPV155

CNPV155 variola B22R-like protein

82.427

99.454

1810

1831

1830

   

SWPV2-150

CNPV156

CNPV156 hypothetical protein

 

96.287

 

834

832

   

SWPV2-151

CNPV157

CNPV157 TGF-beta-like protein

 

87.679

 

343

349

     

CNPV158

CNPV158 TGF-beta-like protein

       

172

     

CNPV159

CNPV159 N1R/p28-like protein

       

337

     

CNPV160

CNPV160 N1R/p28-like protein

       

396

   

SWPV2-152

CNPV161

CNPV161 TGF-beta-like protein

 

99.441

 

358

358

   

SWPV2-153

CNPV162

CNPV162 TGF-beta-like protein

 

97.987

 

149

149

     

CNPV163

CNPV163 hypothetical protein

       

92

     

CNPV164

CNPV164 hypothetical protein

       

98

   

SWPV2-154

CNPV165

CNPV165 N1R/p28-like protein

 

98.75

 

320

346

SWPV2: C-terminus fragment, not likely translated

SWPV1-143

SWPV2-155

CNPV166

CNPV166 Ig-like domain protein

96.812

95.652

345

345

345

SWPV1: Low SNP Density

SWPV1-144

SWPV2-156

CNPV167

CNPV167 Ig-like domain protein

94.767

88.372

172

168

171

SWPV1: Low SNP Density

 

SWPV2-157

CNPV168

CNPV168 N1R/p28-like protein

 

96

 

350

358

 

SWPV1-145

 

CNPV169

CNPV169 N1R/p28-like protein

83.578

 

337

 

332

SWPV1: CNPV-168/169 Fusion

SWPV1-146

SWPV2-158

CNPV170

CNPV170 thymidylate kinase

100

100

121

212

212

SWPV1: N-terminus fragment

SWPV1-147

SWPV2-159

CNPV171

CNPV171 late transcription factor VLTF-1

96.923

100

260

260

260

 

SWPV1-148

SWPV2-160

CNPV172

CNPV172 putative myristylated protein

83.125

99.403

336

335

335

 

SWPV1-149

SWPV2-161

CNPV173

CNPV173 putative myristylated IMV envelope protein

91.358

98.354

243

243

243

 

SWPV1-150

SWPV2-162

CNPV174

CNPV174 conserved hypothetical protein

47.917

100

96

96

96

 

SWPV1-151

SWPV2-163

CNPV175

CNPV175 conserved hypothetical protein

84.158

100

303

303

303

 

SWPV1-152

SWPV2-164

CNPV176

CNPV176 DNA-binding virion core protein

87.747

100

253

252

252

 

SWPV1-153

SWPV2-165

CNPV177

CNPV177 conserved hypothetical protein

84.733

100

131

130

130

 

SWPV1-154

SWPV2-166

CNPV178

CNPV178 putative IMV membrane protein

85.135

100

148

148

148

 

SWPV1-155

SWPV2-167

CNPV179

CNPV179 poly(A) polymerase small subunit PAPS

88.667

100

300

302

302

 

SWPV1-156

SWPV2-168

CNPV180

CNPV180 RNA polymerase subunit RPO22

87.634

99.462

186

186

186

 

SWPV1-157

SWPV2-169

CNPV181

CNPV181 conserved hypothetical protein

82.353

100

136

136

136

 

SWPV1-158

SWPV2-170

CNPV182

CNPV182 RNA polymerase subunit RPO147

93.866

99.922

1288

1288

1288

 

SWPV1-159

SWPV2-171

CNPV183

CNPV183 putative protein-tyrosine phosphatase, virus assembly

85.542

100

166

166

166

 

SWPV1-160

SWPV2-172

CNPV184

CNPV184 conserved hypothetical protein

91.534

100

190

189

189

 

SWPV1-161

SWPV2-173

CNPV185

CNPV185 ankyrin repeat protein

32.632

96.341

337

328

328

 

SWPV1-162

SWPV2-174

CNPV186

CNPV186 IMV envelope protein

100

100

329

330

330

 

SWPV1-163

SWPV2-175

CNPV187

CNPV187 RNA polymerase associated protein RAP94

91.114

99.75

799

799

799

 

SWPV1-164

SWPV2-176

CNPV188

CNPV188 late transcription factor VLTF-4

70.115

92.941

170

170

170

 

SWPV1-165

SWPV2-177

CNPV189

CNPV189 DNA topoisomerase

88.608

99.684

316

316

316

 

SWPV1-166

SWPV2-178

CNPV190

CNPV190 conserved hypothetical protein

77.124

99.346

153

153

153

 

SWPV1-167

SWPV2-179

CNPV191

CNPV191 conserved hypothetical protein

70.874

99.029

103

103

103

 

SWPV1-168

SWPV2-180

CNPV192

CNPV192 mRNA capping enzyme large subunit

88.221

99.764

848

846

846

 

SWPV1-169

SWPV2-181

CNPV193

CNPV193 HT motif protein

72.619

100

104

106

106

 

SWPV1-170

SWPV2-182

CNPV194

CNPV194 virion protein

71.223

100

139

140

140

 

SWPV1-171

SWPV2-183

CNPV195

CNPV195 hypothetical protein

51.2

98.611

139

144

144

 

SWPV1-172

SWPV2-184

CNPV196

CNPV196 conserved hypothetical protein

62.963

100

189

190

190

 

SWPV1-173

SWPV2-185

CNPV197

CNPV197 N1R/p28-like protein

61.679

97.818

279

275

275

 

SWPV1-174

SWPV2-186

CNPV198

CNPV198 C-type lectin-like protein

55.844

99.359

159

156

156

 

SWPV1-175

SWPV2-187

CNPV199

CNPV199 deoxycytidine kinase-like protein

79.111

100

222

225

225

 

SWPV1-176

SWPV2-188

CNPV200

CNPV200 Rep-like protein

72.903

97.59

152

166

166

 

SWPV1-177

SWPV2-189

CNPV201

CNPV201 conserved hypothetical protein

60

97.661

197

167

192

 

SWPV1-178

SWPV2-190

CNPV202

CNPV202 N1R/p28-like protein

69.203

99.638

275

276

276

 

SWPV1-179

SWPV2-191

CNPV203

CNPV203 N1R/p28-like protein

64.935

99.738

380

382

382

 

SWPV1-180

SWPV2-192

CNPV204

CNPV204 conserved hypothetical protein

53.226

100

53

61

61

 

SWPV1-181

SWPV2-193

CNPV205

CNPV205 N1R/p28-like protein

71.885

99.371

317

318

318

 

SWPV1-182

SWPV2-194

CNPV206

CNPV206 putative photolyase

84.989

99.364

464

472

472

 

SWPV1-183

   

CNPV081 Ig-like domain protein

53.988

 

332

 

333

 

SWPV1-184

SWPV2-195

CNPV207

CNPV207 N1R/p28-like protein

64.535

98.235

193

173

183

 

SWPV1-185

SWPV2-196

CNPV208

CNPV208 conserved hypothetical protein

52.239

97.5

172

200

200

 

SWPV1-186

SWPV2-197

CNPV209

CNPV209 N1R/p28-like protein

65.686

100

311

310

310

 

SWPV1-187

SWPV2-198

CNPV210

CNPV210 N1R/p28-like protein

74.419

99.237

130

131

131

 

SWPV1-188

SWPV2-199

CNPV211

CNPV211 conserved hypothetical protein

49.02

98.148

54

54

54

 

SWPV1-189

SWPV2-200

CNPV212

CNPV212 N1R/p28-like protein

76.136

98.295

175

176

176

 

SWPV1-190

   

no significant BLAST hits

   

70

   

SWPV1: Possible Unique ORF

SWPV1-191

SWPV2-201

CNPV213

CNPV213 deoxycytidine kinase-like protein

58.768

99.539

216

216

217

   

SWPV2-202

CNPV214

CNPV214 vaccinia C4L/C10L-like protein

 

99.438

 

356

356

 

SWPV1-192

   

CNPV012 conserved hypothetical protein

37.41

 

165

 

189

 

SWPV1-193

   

CNPV223 ankyrin repeat protein

31.579

 

674

 

847

 

SWPV1-194

SWPV2-203

CNPV215

CNPV215 CC chemokine-like protein

49.751

96.078

202

204

204

   

SWPV2-204

CNPV216

CNPV216 conserved hypothetical protein

 

98.762

 

401

404

   

SWPV2-205

CNPV217

CNPV217 N1R/p28-like protein

 

95.152

 

330

330

 

SWPV1-195

   

CNPV223 ankyrin repeat protein

38.474

 

729

 

847

SWPV1: N-terminus fragment

SWPV1-196

SWPV2-206

CNPV218

CNPV218 N1R/p28-like protein

66.667

99.522

318

223

437

SWPV2: N-terminus fragment

SWPV1-197

   

CNPV228 N1R/p28-like protein

53

 

161

 

371

SWPV1: N-terminus fragment

SWPV1-198

   

CNPV160 N1R/p28-like protein

79.293

 

367

 

396

SWPV1: Fragment/CNPV-220/221 Fusion

SWPV1-199

   

CNPV160 N1R/p28-like protein

66.582

 

360

 

396

SWPV1: Paralog to SWPV1-198?

SWPV1-200

   

CNPV161 TGF-beta-like protein

36.882

 

256

 

358

 

SWPV1-201

   

CNPV162 TGF-beta-like protein

50

 

141

 

149

 

SWPV1-202

   

no significant BLAST hits

   

98

   

SWPV1: Possible Unique ORF

 

SWPV2-207

CNPV219

CNPV219 N1R/p28-like protein

 

99.713

 

349

349

   

SWPV2-208

CNPV220

CNPV220 N1R/p28-like protein

 

80.263

 

85

178

SWPV2: N-terminus fragment

 

SWPV2-209

CNPV221

CNPV221 N1R/p28-like protein

 

94.231

 

213

281

SWPV2: N-terminus fragment

 

SWPV2-210

CNPV222

CNPV222 N1R/p28-like protein

 

99.649

 

285

285

   

SWPV2-211

CNPV223

CNPV223 ankyrin repeat protein

 

98.819

 

847

847

 

SWPV1-203

SWPV2-212

CNPV224

CNPV224 hypothetical protein

50.382

100

126

239

239

   

SWPV2-213

CNPV225

CNPV225 N1R/p28-like protein

 

74.038

 

94

159

SWPV2: N-terminus fragment

 

SWPV2-214

CNPV226

CNPV226 N1R/p28-like protein

 

96.825

 

126

134

     

CNPV227

CNPV227 N1R/p28-like protein

       

359

     

CNPV228

CNPV228 N1R/p28-like protein

       

371

 

SWPV1-204

SWPV2-215

CNPV229

CNPV229 ankyrin repeat protein

44.498

97.926

423

434

434

   

SWPV2-216

CNPV230

CNPV230 hypothetical protein

 

98.462

 

65

65

 

SWPV1-205

SWPV2-217

CNPV231

CNPV231 MyD116-like domain protein

72.222

98.101

100

158

158

SWPV1: large in-frame deletions

SWPV1-206

SWPV2-218

CNPV232

CNPV232 CC chemokine-like protein

59.024

93.137

205

204

204

 

SWPV1-207

SWPV2-219

CNPV233

CNPV233 ankyrin repeat protein

56.936

99.788

476

471

471

   

SWPV2-220

CNPV234

CNPV234 ankyrin repeat protein

 

100

 

508

508

SWPV2: High SNP Density

SWPV1-208

   

PEPV008 vaccinia C4L/C10L-like protein

55

 

420

 

411

   

SWPV2-221

CNPV235

CNPV235 conserved hypothetical protein

 

88.426

 

432

432

 

SWPV1-209

SWPV2-222

CNPV236

CNPV236 ribonucleotide reductase small subunit

83.282

95.666

324

323

323

   

SWPV2-223

CNPV237

CNPV237 ankyrin repeat protein

 

97.732

 

441

441

 

SWPV1-210

   

CNPV234 ankyrin repeat protein

30.545

 

559

 

508

 

SWPV1-211

SWPV2-224

CNPV238

CNPV238 late transcription factor VLTF-3

95.111

100

225

225

225

 

SWPV1-212

SWPV2-225

CNPV239

CNPV239 virion redox protein

80.282

100

72

75

75

 

SWPV1-213

SWPV2-226

CNPV240

CNPV240 virion core protein P4b

88.788

99.848

660

659

659

 

SWPV1-214

SWPV2-227

CNPV241

CNPV241 immunodominant virion protein

47.368

99.07

242

215

215

 

SWPV1-215

SWPV2-228

CNPV242

CNPV242 RNA polymerase subunit RPO19

88.166

98.817

169

169

169

 

SWPV1-216

SWPV2-229

CNPV243

CNPV243 conserved hypothetical protein

81.501

98.928

373

373

373

 

SWPV1-217

SWPV2-230

CNPV244

CNPV244 early transcription factor large subunit VETFL

95.91

100

709

709

709

 

SWPV1-218

SWPV2-231

CNPV245

CNPV245 intermediate transcription factor VITF-3

90.667

99.667

300

300

300

 

SWPV1-219

SWPV2-232

CNPV246

CNPV246 putative IMV membrane protein

80

98.667

76

75

75

 

SWPV1-220

SWPV2-233

CNPV247

CNPV247 virion core protein P4a

81.494

99.664

897

893

893

 

SWPV1-221

SWPV2-234

CNPV248

CNPV248 conserved hypothetical protein

78.723

100

281

279

279

 

SWPV1-222

SWPV2-235

CNPV249

CNPV249 virion protein

74.269

99.405

167

168

168

 

SWPV1-223

SWPV2-236

CNPV250

CNPV250 conserved hypothetical protein

36.082

94.595

73

56

99

SWPV2: N-terminus fragment

SWPV1-224

SWPV2-237

CNPV251

CNPV251 putative IMV membrane protein

69.565

100

69

69

69

 

SWPV1-225

SWPV2-238

CNPV252

CNPV252 putative IMV membrane protein

68.478

98.913

92

92

92

 

SWPV1-226

SWPV2-239

CNPV253

CNPV253 putative IMV membrane virulence factor

73.585

98.113

53

53

53

 

SWPV1-227

SWPV2-240

CNPV254

CNPV254 conserved hypothetical protein

75

98.958

96

96

96

 

SWPV1-228

SWPV2-241

CNPV255

CNPV255 predicted myristylated protein

84.282

99.728

368

368

368

 

SWPV1-229

SWPV2-242

CNPV256

CNPV256 putative phosphorylated IMV membrane protein

81.006

100

188

192

192

 

SWPV1-230

SWPV2-243

CNPV257

CNPV257 DNA helicase, transcriptional elongation

87.229

99.784

462

462

462

 

SWPV1-231

SWPV2-244

CNPV258

CNPV258 conserved hypothetical protein

77.647

100

86

89

89

 

SWPV1-232

SWPV2-245

CNPV259

CNPV259 DNA polymerase processivity factor

81.86

100

432

112

434

 

SWPV1-233

SWPV2-246

CNPV260

CNPV260 conserved hypothetical protein

91.071

99.77

112

434

112

 

SWPV1-234

SWPV2-247

CNPV261

CNPV261 Holliday junction resolvase protein

80.405

100

151

152

152

 

SWPV1-235

SWPV2-248

CNPV262

CNPV262 intermediate transcription factor VITF-3

86.126

100

383

383

383

 

SWPV1-236

SWPV2-249

CNPV263

CNPV263 RNA polymerase subunit RPO132

94.301

100

1158

1157

1157

 

SWPV1-237

SWPV2-250

CNPV264

CNPV264 A type inclusion-like protein

81.015

99.502

602

601

603

 

SWPV1-238

SWPV2-251

CNPV265

CNPV265 A type inclusion-like/fusion protein

67.015

99.789

471

475

475

 

SWPV1-239

SWPV2-252

CNPV266

CNPV266 conserved hypothetical protein

89.286

99.286

140

140

140

 

SWPV1-240

SWPV2-253

CNPV267

CNPV267 RNA polymerase subunit RPO35

77.558

99.016

303

305

305

 

SWPV1-241

SWPV2-254

CNPV268

CNPV268 conserved hypothetical protein

73.529

100

72

75

75

 

SWPV1-242

SWPV2-255

CNPV269

CNPV269 conserved hypothetical protein

70.796

100

113

113

113

 

SWPV1-243

SWPV2-256

CNPV270

CNPV270 conserved hypothetical protein

70.588

100

119

120

120

 

SWPV1-244

SWPV2-257

CNPV271

CNPV271 DNA packaging protein

89.963

99.648

272

284

284

 

SWPV1-245

SWPV2-258

CNPV272

CNPV272 C-type lectin-like EEV protein

76.136

99.448

182

181

181

 

SWPV1-246

   

CNPV012 conserved hypothetical protein

30.147

 

172

 

189

 

SWPV1-247

SWPV2-259

CNPV273

CNPV273 conserved hypothetical protein

62.816

99.635

276

274

274

 

SWPV1-248

SWPV2-260

CNPV274

CNPV274 putative tyrosine protein kinase

63.197

99.628

286

269

269

 

SWPV1-249

SWPV2-261

CNPV275

CNPV275 putative serpin

72.271

99.408

340

338

338

 

SWPV1-250

SWPV2-262

CNPV276

CNPV276 conserved hypothetical protein

56.667

100

227

252

252

 

SWPV1-251

SWPV2-263

CNPV277

CNPV277 G protein-coupled receptor-like protein

90

99.677

310

310

310

 

SWPV1-252

SWPV2-264

CNPV278

CNPV278 conserved hypothetical protein

89.691

98.958

97

96

96

 

SWPV1-253

SWPV2-265

CNPV279

CNPV279 beta-NGF-like protein

63.415

100

167

169

169

 

SWPV1-254

SWPV2-266

CNPV280

CNPV280 HT motif protein

67.692

99.231

134

130

130

 

SWPV1-255

SWPV2-267

CNPV281

CNPV281 conserved hypothetical protein

71.728

99.533

192

214

214

 

SWPV1-256

SWPV2-268

CNPV282

CNPV282 HT motif protein

71.552

100

118

120

120

 

SWPV1-257

SWPV2-269

CNPV283

CNPV283 CC chemokine-like protein

63.208

100

110

111

111

 

SWPV1-258

SWPV2-270

CNPV284

CNPV284 putative interleukin binding protein

37.405

90.769

192

193

195

 

SWPV1-259

SWPV2-271

CNPV285

CNPV285 EGF-like protein

62.992

99.206

123

126

126

 

SWPV1-260

SWPV2-272

CNPV286

CNPV286 putative serine/threonine protein kinase

76.744

99.672

303

305

305

 

SWPV1-261

SWPV2-273

CNPV287

CNPV287 conserved hypothetical protein

73.248

98.758

165

160

161

 

SWPV1-262

SWPV2-274

CNPV288

CNPV288 C-type lectin-like protein

52.414

88.435

163

147

147

 

SWPV1-263

SWPV2-275

CNPV289

CNPV289 putative interleukin binding protein

58.993

99.281

132

139

139

 

SWPV1-264

SWPV2-276

CNPV290

CNPV290 conserved hypothetical protein

84

83.784

75

75

75

 

SWPV1-265

SWPV2-277

CNPV291

CNPV291 ankyrin repeat protein

48.067

98.99

613

594

594

 

SWPV1-266

SWPV2-278

CNPV292

CNPV292 hypothetical protein

37.209

100

101

74

74

 

SWPV1-267

SWPV2-279

CNPV293

CNPV293 ankyrin repeat protein

55.634

99.648

305

284

284

 

SWPV1-268

SWPV2-280

CNPV294

CNPV294 ankyrin repeat protein

68.447

99.07

424

430

430

 

SWPV1-269

   

PIPV223 host range protein

51

 

138

 

143

 

SWPV1-270

   

FWPV217 hypothetical protein

50

 

330

 

328

 

SWPV1-271

SWPV2-281

CNPV295

CNPV295 ankyrin repeat protein

57.736

100

264

396

396

 

SWPV1-272

SWPV2-282

CNPV296

CNPV296 ankyrin repeat protein

67.195

99.127

438

458

458

 

SWPV1-273

SWPV2-283

CNPV297

CNPV297 ankyrin repeat protein

54.972

99.457

717

737

737

 

SWPV1-274

SWPV2-284

CNPV298

CNPV298 ankyrin repeat protein

64.591

99.825

573

571

571

 

SWPV1-275

SWPV2-285

CNPV299

CNPV299 putative serine/threonine protein kinase

67.893

99.333

303

300

300

 

SWPV1-276

SWPV2-286

CNPV300

CNPV300 ankyrin repeat protein

75.82

98.77

253

244

244

 

SWPV1-277

   

CNPV219 N1R/p28-like protein

28.467

 

142

 

349

 

SWPV1-278

   

CNPV228 N1R/p28-like protein

43.038

 

87

 

371

 

SWPV1-279

   

TKPV163 ankyrin repeat protein

40

 

432

 

434

 

SWPV1-280

SWPV2-287

CNPV301

CNPV301 ankyrin repeat protein

59.546

99.241

510

527

527

 

SWPV1-281

SWPV2-288

CNPV302

CNPV302 conserved hypothetical protein

45.026

100

175

193

193

 

SWPV1-282

SWPV2-289

CNPV303

CNPV303 ankyrin repeat protein

68.938

99.4

499

500

500

 

SWPV1-283

SWPV2-290

CNPV304

CNPV304 ankyrin repeat protein

62.105

99.785

476

466

466

 

SWPV1-284

SWPV2-291

CNPV305

CNPV305 N1R/p28-like protein

54.545

100

261

262

262

 

SWPV1-285

SWPV2-292

CNPV306

CNPV306 hypothetical protein

30.769

98.611

73

72

72

 

SWPV1-286

SWPV2-293

CNPV307

CNPV307 C-type lectin-like protein

55.828

100

165

154

154

 

SWPV1-287

SWPV2-294

CNPV308

CNPV308 ankyrin repeat protein

58.757

99.44

359

357

357

 

SWPV1-288

SWPV2-295

CNPV309

CNPV309 ankyrin repeat protein

69.388

100

195

196

196

 

SWPV1-289

SWPV2-296

CNPV310

CNPV310 ankyrin repeat protein

47.359

99.255

540

537

537

 

SWPV1-290

SWPV2-297

CNPV311

CNPV311 EFc-like protein

54.4

99.194

125

124

124

 

SWPV1-291

SWPV2-298

CNPV312

CNPV312 conserved hypothetical protein

53.704

98.795

168

166

166

 

SWPV1-292

SWPV2-299

CNPV313

CNPV313 Ig-like domain protein

69.43

98.165

213

218

218

 

SWPV1-293

SWPV2-300

CNPV314

CNPV314 ankyrin repeat protein

71.552

99.829

580

629

584

 

SWPV1-294

   

CNPV011 ankyrin repeat protein

32

 

513

 

586

 

SWPV1-295

SWPV2-301

CNPV315

CNPV315 G protein-coupled receptor-like protein

59.17

99.365

315

315

315

 

SWPV1-296

   

CNPV014 Ig-like domain protein

59.624

 

230

 

490

 

SWPV1-297

   

CNPV014 Ig-like domain protein

59.641

 

240

 

490

 

SWPV1-298

   

CNPV015 ankyrin repeat protein

45.455

 

74

 

528

 

SWPV1-299

   

CNPV150 ankyrin repeat protein

36.364

 

84

 

351

 

SWPV1-300

SWPV2-302

CNPV316

CNPV316 ankyrin repeat protein

35.294

99.632

162

544

544

   

SWPV2-303

CNPV317

CNPV317 hypothetical protein

 

100

 

55

55

   

SWPV2-304

CNPV318

CNPV318 ankyrin repeat protein

 

98.054

 

514

514

   

SWPV2-305

CNPV319

CNPV319 ankyrin repeat protein

 

97.638

 

637

739

SWPV2: C-terminus fragment, not likely translated

SWPV1-301

   

PIPV253 EFc-like protein

69

 

124

 

124

 

SWPV1-302

   

CNPV015 ankyrin repeat protein

45.276

 

520

 

528

 

SWPV1-303

   

CNPV223 ankyrin repeat protein

40

 

480

 

847

 

SWPV1-304

SWPV2-306

CNPV320

CNPV320 Ig-like domain protein

76.858

99.787

468

469

469

   

SWPV2-307

CNPV321

CNPV321 EFc-like protein

 

99.194

 

124

124

   

SWPV2-308

CNPV322

CNPV322 ankyrin repeat protein

 

98.408

 

689

690

 

SWPV1-305

   

CNPV035 C-type lectin-like protein

35.556

 

138

 

134

 

SWPV1-306

   

CNPV008 C-type lectin-like protein

50

 

174

 

169

 

SWPV1-307

SWPV2-309

CNPV323

CNPV323 conserved hypothetical protein

75.61

93.651

84

186

182

 

SWPV1-308

SWPV2-310

CNPV324

CNPV324 conserved hypothetical protein

87.387

99.55

220

222

222

 

SWPV1-309

 

CNPV325

CNPV325 ankyrin repeat protein

56.458

 

468

 

514

 

SWPV1-310

SWPV2-311

CNPV326

CNPV326 C-type lectin-like protein

32.044

85.99

181

208

204

   

SWPV2-312

CNPV327

CNPV327 hypothetical protein

 

92.941

 

171

171

     

CNPV328

CNPV328 hypothetical protein

       

72

 

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